genBaRcode: Analysis and Visualization Tools for Genetic Barcode Data

Provides the necessary functions to identify and extract a selection of already available barcode constructs (Cornils, K. et al. (2014) <doi:10.1093/nar/gku081>) and freely choosable barcode designs from next generation sequence (NGS) data. Furthermore, it offers the possibility to account for sequence errors, the calculation of barcode similarities and provides a variety of visualisation tools (Thielecke, L. et al. (2017) <doi:10.1038/srep43249>).

Package details

AuthorLars Thielecke <lars.thielecke@tu-dresden.de>
MaintainerLars Thielecke <lars.thielecke@tu-dresden.de>
LicenseLGPL
Version1.2.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("genBaRcode")

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genBaRcode documentation built on Oct. 30, 2019, 9:55 a.m.