error_correction_treePlot: Tree Plot
In genBaRcode: Analysis and Visualization Tools for Genetic Barcode Data
View source: R/plot_functions.R
error_correction_treePlot R Documentation
Tree Plot
Description
creates a Tree Plot visualising of the barcode clustering as part of the error correction process.
Usage
error_correction_treePlot(edges, vertices)
Arguments
edges
a data frame containing edge definitions by two columns calles "from" and "to". Such data frame will be returned by the error_correction function with the EC_analysis parameter set to TRUE.
vertices
a data frame with at least one column containing a list of nodes (also returned by the error_correction function with the EC_analysis parameter set to TRUE)
Value
a ggplot2 object.
genBaRcode documentation built on March 31, 2023, 11:02 p.m.
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View source: R/plot_functions.R
| error_correction_treePlot | R Documentation |
Tree Plot
Description
creates a Tree Plot visualising of the barcode clustering as part of the error correction process.
Usage
error_correction_treePlot(edges, vertices)
Arguments
edges |
a data frame containing edge definitions by two columns calles "from" and "to". Such data frame will be returned by the error_correction function with the EC_analysis parameter set to TRUE. |
vertices |
a data frame with at least one column containing a list of nodes (also returned by the error_correction function with the EC_analysis parameter set to TRUE) |
Value
a ggplot2 object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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