Man pages for genBaRcode
Analysis and Visualization Tools for Genetic Barcode Data

asBCdatData Type Conversion
BC_datBarcode distribution of an example experiment.
BCdat-classBCdat class
checkBarcodeDatacheckBarcodeData
createGDFCreating a gdf File
errorCorrectionError Correction
errorCorrection_multipleError Correction for multiple objects
extractBarcodesBarcode extraction
extractBarcodes_multipleBarcode extraction for multiple backbones
extractBarcodes_singleBarcode extraction for a single backbone
genBaRcode_appShiny App
generateKirchenplotPlotting a Kirchenplot
generateTimeSeriesDataGenerating Time Series Data Object
getBackbonePredefined Barcode Backbone Sequences
ggplotDistanceGraphPlotting a Distance Network
hybridsIdentificationIdentifies hybrid barcodes
ori_BCsList of Barcodes.
plotClusterGgTreePlotting a Cluster ggTree
plotClusterTreePlotting a Cluster Tree
plotDistanceIgraphPlotting a Distance Network
plotDistanceVisNetworkPlotting a Distance Network
plotNucFrequencyPlotting Nucleotide Frequency
plotQualityScoreDisPlotting Quality Score Distribution
plotQualityScorePerCyclePlotting Quality Score per Cycle
plotReadFrequenciesPlotting a Barplot
plotSeqLogoPlots a sequence logo
plotTimeSeriesPlotting Time Series Data
plotVennDiagrammPlotting a VennDiagram
prepareDatObjectData Object Preparation
processingRawDataData processing
qualityFilteringQuality Filtering
readBCdatData Input
genBaRcode documentation built on Aug. 10, 2018, 5:03 p.m.