API for genBaRcode
Analysis and Visualization Tools for Genetic Barcode Data

Global functions
.createPatternFile Man page Source code
.generateColors Man page Source code
.getBarcodeFilter Man page Source code
.getDiagonalIndex Man page Source code
.getMinDist Man page Source code
.getMinDist_one_sample Source code
.getWobblePos Man page Source code
.hex2rgbColor Man page Source code
.revComp Man page Source code
.revComp_EqLength Man page Source code
.revComp_UneqLength Man page Source code
.testDirIdentifier Man page Source code
BC_dat Man page
BC_dat_EC Man page
BC_matching Source code
BCdat Man page
BCdat-class Man page
asBCdat Man page Source code
checkBackbone Source code
checkBarcodeData Source code
checkDir Source code
checkLabel Source code
checkReads Source code
com_pair Man page Source code
createGDF Man page Source code
errorCorrection Man page Source code
errorCorrection_multiple Source code
errorCorrection_multiple_old Source code
errorCorrection_single Source code
errorCorrection_single_biggest Source code
errorCorrection_single_clustering_absolute Source code
errorCorrection_single_clustering_stepwise Source code
errorCorrection_single_connections Source code
errorCorrection_single_graphComp Source code
errorCorrection_single_variation Source code
error_correction_circlePlot Man page Source code
error_correction_clustered_HDs Man page Source code
error_correction_treePlot Man page Source code
extractBarcodes Man page Source code
extractWobble Source code
fixBorderlineBCs Source code
genBaRcode_app Man page Source code
generateKirchenplot Man page Source code
generateKirchenplot_separate Source code
generateKirchenplot_single Source code
generateTimeSeriesData Man page Source code
getBackbone Man page Source code
getBackboneSelection Man page Source code
getLabel Man page Source code
getReads Man page Source code
getResultsDir Man page Source code
get_help_txt Source code
ggplotDistanceGraph Man page Source code
ggplotDistanceGraph_EC Man page Source code
hybridsIdentification Man page Source code
plotClusterGgTree Man page Source code
plotClusterTree Man page Source code
plotDistanceIgraph Man page Source code
plotDistanceVisNetwork Man page Source code
plotDistanceVisNetwork_EC Man page Source code
plotNucFrequency Man page
plotQualityScoreDis Man page
plotQualityScorePerCycle Man page
plotReadFrequencies Man page
plotSeqLogo Man page
plotTimeSeries Man page Source code
plotVennDiagram Man page Source code
prepareDatObject Man page Source code
processingRawData Man page Source code
processingRawData_multiple Source code
processingRawData_single Source code
qualityFiltering Man page Source code
readBCdat Man page Source code
setBackbone Man page Source code
setLabel Man page Source code
setReads Man page Source code
setResultsDir Man page Source code
genBaRcode documentation built on Oct. 30, 2019, 9:55 a.m.