API for genBaRcode
Analysis and Visualization Tools for Genetic Barcode Data
| Global functions | |
|---|---|
| .createPatternFile | Man page Source code |
| .generateColors | Man page Source code |
| .getBarcodeFilter | Man page Source code |
| .getDiagonalIndex | Man page Source code |
| .getMinDist | Man page Source code |
| .getMinDist_one_sample | Source code |
| .getWobblePos | Man page Source code |
| .hex2rgbColor | Man page Source code |
| .revComp | Man page Source code |
| .revComp_EqLength | Man page Source code |
| .revComp_UneqLength | Man page Source code |
| .testDirIdentifier | Man page Source code |
| BC_dat | Man page |
| BC_dat_EC | Man page |
| BC_matching | Source code |
| BCdat | Man page |
| BCdat-class | Man page |
| asBCdat | Man page Source code |
| checkBackbone | Source code |
| checkBarcodeData | Source code |
| checkDir | Source code |
| checkLabel | Source code |
| checkReads | Source code |
| com_pair | Man page Source code |
| createGDF | Man page Source code |
| errorCorrection | Man page Source code |
| errorCorrection_multiple | Source code |
| errorCorrection_multiple_old | Source code |
| errorCorrection_single | Source code |
| errorCorrection_single_biggest | Source code |
| errorCorrection_single_clustering_absolute | Source code |
| errorCorrection_single_clustering_stepwise | Source code |
| errorCorrection_single_connections | Source code |
| errorCorrection_single_graphComp | Source code |
| errorCorrection_single_variation | Source code |
| error_correction_circlePlot | Man page Source code |
| error_correction_clustered_HDs | Man page Source code |
| error_correction_treePlot | Man page Source code |
| extractBarcodes | Man page Source code |
| extractWobble | Source code |
| fixBorderlineBCs | Source code |
| genBaRcode_app | Man page Source code |
| generateKirchenplot | Man page Source code |
| generateKirchenplot_separate | Source code |
| generateKirchenplot_single | Source code |
| generateTimeSeriesData | Man page Source code |
| getBackbone | Man page Source code |
| getBackboneSelection | Man page Source code |
| getLabel | Man page Source code |
| getReads | Man page Source code |
| getResultsDir | Man page Source code |
| getWobble | Source code |
| get_help_txt | Source code |
| ggplotDistanceGraph | Man page Source code |
| ggplotDistanceGraph_EC | Man page Source code |
| hybridsIdentification | Man page Source code |
| plotClusterGgTree | Man page Source code |
| plotClusterTree | Man page Source code |
| plotDistanceIgraph | Man page Source code |
| plotDistanceVisNetwork | Man page Source code |
| plotDistanceVisNetwork_EC | Man page Source code |
| plotNucFrequency | Man page |
| plotQualityScoreDis | Man page |
| plotQualityScorePerCycle | Man page |
| plotReadFrequencies | Man page |
| plotSeqLogo | Man page |
| plotTimeSeries | Man page Source code |
| plotVennDiagram | Man page Source code |
| prepareDatObject | Man page Source code |
| processingRawData | Man page Source code |
| processingRawData_multiple | Source code |
| processingRawData_single | Source code |
| qualityFiltering | Man page Source code |
| readBCdat | Man page Source code |
| setBackbone | Man page Source code |
| setLabel | Man page Source code |
| setReads | Man page Source code |
| setResultsDir | Man page Source code |
