read_in_Master_SNPs_data: Read in GrandMasterSNPs output

Description Usage Arguments Value Examples

View source: R/read_Master_SNPs_Data.R

Description

This reads in single nucleotide polymorphism markers generated by the GrandMasterSNPs Perl program.

Usage

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Arguments

x

This is a tab delimited text file from GrandMasterSNPs Perl program

...

Other arguments passed to the function

Value

A data frame of GrandMasterSNPs markers

Examples

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##this should be used with the output of the PERL pipeline "GrandMasterSNPs"
marker_file <- system.file("extdata/filtered_markers.txt", package = "genotypeR")

GrandMasterSNPs_markers  <- read_in_Master_SNPs_data(marker_file)

genotypeR documentation built on May 22, 2018, 5:07 p.m.