remap.q2t: Remap coordinates from BLAT query sequence to BLAT target...
In gtx: Genetics ToolboX
Description
Usage
Arguments
Value
Author(s)
Description
For a single BLAT match of a query sequence against a target sequence,
a vector of nucleotide positions in the query sequence are remapped to
the corresponding nucleotide positions in the target sequence.
Usage
1
remap.q2t(qpos, blatres)
Arguments
qpos
a vector of 0-offset positions in the query sequence.
blatres
a single match from BLAT.
Value
A vector of remapped positions in the target sequence.
Author(s)
Toby Johnson Toby.x.Johnson@gsk.com
gtx documentation built on May 2, 2019, 5:08 a.m.
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Description Usage Arguments Value Author(s)
Description
For a single BLAT match of a query sequence against a target sequence, a vector of nucleotide positions in the query sequence are remapped to the corresponding nucleotide positions in the target sequence.
Usage
1 | remap.q2t(qpos, blatres)
|
Arguments
qpos |
a vector of 0-offset positions in the query sequence. |
blatres |
a single match from BLAT. |
Value
A vector of remapped positions in the target sequence.
Author(s)
Toby Johnson Toby.x.Johnson@gsk.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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