Computes a p-value for the exact test of Hardy–Weinberg proportions, for genotype counts for a biallelic locus, as described by Wiggington et al. (2005)
Vector of genotypes.
This function is a wrapper for
snphweCounts, which uses
code by Wiggington et al. to compute a P-value for an exact test of
This function requires that when
g is sorted, the order is
hom/het/hom. For example
g can be additively coded genotypes
(0, 1, 2), or text coded genotypes like AA, AC, CC. For text coded
genotypes the heterozygote MUST ALWAYS be coded the same way, e.g. a
mixture of AC and CA are not allowed.
Toby Johnson [email protected]
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