API for hpoPlot
Functions for Plotting HPO Terms
| Global functions | |
|---|---|
| apply.term.filters | Man page |
| calibrate.sizes | Man page |
| clean.terms | Man page |
| exclude.branch | Man page |
| get.ancestors | Man page |
| get.case.based.colours | Man page |
| get.case.based.labels | Man page |
| get.case.term.matrix | Man page |
| get.code.node.labels | Man page |
| get.descendants | Man page |
| get.frequency.based.colours | Man page |
| get.frequency.based.labels | Man page |
| get.frequency.based.sizes | Man page |
| get.full.labels | Man page |
| get.hpo.graph | Man page |
| get.informative.node.labels | Man page |
| get.mpo.to.hpo | Man page |
| get.node.friendly.long.names | Man page |
| get.ontology | Man page |
| get.pop.frequency.based.colours | Man page |
| get.shortened.names | Man page |
| get.significance.based.sizes | Man page |
| get.simple.node.labels | Man page |
| get.term.adjacency.matrix | Man page |
| get.term.descendancy.matrix | Man page |
| get.term.frequencies | Man page |
| get.term.info.content | Man page |
| get.term.pseudo.adjacency.matrix | Man page |
| hpo.plot | Man page |
| hpo.terms | Man page |
| intersection.with.branches | Man page |
| mpo.terms | Man page |
| mpo.to.hpo | Man page |
| n.most.frequent.terms | Man page |
| p.values.for.occurrence.of.term.in.group | Man page |
| prune.branch | Man page |
| remove.links | Man page |
| remove.non.pa.terms | Man page |
| remove.terms.with.less.than.n.occurrences | Man page |
| remove.uninformative.for.plot | Man page |
| remove.uninformative.terms | Man page |
| setDimNames | Man page |
| simpleCap | Man page |
| swap.out.alt.ids | Man page |
| term.set.list.from.character | Man page |
