n.most.frequent.terms: Select most frequently annotated terms from a set of...

In hpoPlot: Functions for Plotting HPO Terms

Description

Select most frequently annotated terms from a set of phenotypes

Usage

n.most.frequent.terms(hpo.terms, terms, plotting.context, n)

Arguments

hpo.terms	R-Object representation of HPO
terms	Character vector of HPO terms
plotting.context	List object with hpo.phenotypes slot for list of character vectors of terms
n	Integer

Value

Character vector of length at most n

See Also

remove.terms.with.less.than.n.occurrences, remove.uninformative.for.plot

Examples

data(hpo.terms)
n.most.frequent.terms(hpo.terms, c("HP:0001873"), 
list(hpo.phenotypes=list("HP:0001873", "HP:0001902")), n=2)

Example output

character(0)

hpoPlot documentation built on May 2, 2019, 5:52 a.m.