get.frequency.based.colours: Function to colour HPO nodes in plot with colours based on...
In hpoPlot: Functions for Plotting HPO Terms
Description
Usage
Arguments
Value
Description
Function to colour HPO nodes in plot with colours based on frequency with which terms appear in phenotypes
Usage
1
2
get.frequency.based.colours(hpo.terms, terms, plotting.context,
colour.func = NULL)
Arguments
hpo.terms
R-Object representation of HPO
terms
Character vector of HPO terms
plotting.context
List object with hpo.phenotypes slot for list of character vectors of terms
colour.func
Function capable of returning a set of colours, given the number of colours it needs to return
Value
Character vector of colours, named by term
hpoPlot documentation built on May 2, 2019, 5:52 a.m.
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Description Usage Arguments Value
Description
Function to colour HPO nodes in plot with colours based on frequency with which terms appear in phenotypes
Usage
1 2 | get.frequency.based.colours(hpo.terms, terms, plotting.context,
colour.func = NULL)
|
Arguments
hpo.terms |
R-Object representation of HPO |
terms |
Character vector of HPO terms |
plotting.context |
List object with hpo.phenotypes slot for list of character vectors of terms |
colour.func |
Function capable of returning a set of colours, given the number of colours it needs to return |
Value
Character vector of colours, named by term
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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