remove.uninformative.for.plot: Remove uninformative terms (fitting plotting filter format)

In hpoPlot: Functions for Plotting HPO Terms

Description

Remove uninformative terms (fitting plotting filter format)

Usage

remove.uninformative.for.plot(hpo.terms, terms = get.ancestors(hpo.terms,
  unlist(plotting.context$hpo.phenotypes)), plotting.context)

Arguments

hpo.terms	R-Object representation of HPO
terms	Character vector of HPO terms
plotting.context	List object with hpo.phenotypes slot for list of character vectors of terms

Value

Character vector

See Also

remove.terms.with.less.than.n.occurrences, n.most.frequent.terms

Examples

data(hpo.terms)
remove.uninformative.for.plot(hpo.terms, 
c("HP:0001873"), list(hpo.phenotypes=list("HP:0001873", "HP:0001902")))

Example output

[1] "HP:0001873"

hpoPlot documentation built on May 2, 2019, 5:52 a.m.