Description Usage Arguments Value Author(s) References Examples
Loci are randomly devided into two equal groups and the correlation coefficient between the resulting sMLH values is calculated.
1  HHC(genotypes, reps = 100, CI = 0.95)

genotypes 

reps 
number of repetitions, i.e. splittings of the dataset 
CI 
size of the confidence interval around the mean hethet correlation (default is 0.95) 
call 
function call. 
HHC_vals 
vector of HHC's obtained by randomly splitting the dataset 
summary_exp_r2 
r2 mean and sd for each number of subsetted loci 
nobs 
number of observations 
nloc 
number of markers 
Martin A. Stoffel (martin.adam.stoffel@gmail.com)
Balloux, F., Amos, W., & Coulson, T. (2004). Does heterozygosity estimate inbreeding in real populations?. Molecular Ecology, 13(10), 30213031.
1 2 3  data(mouse_msats)
genotypes < convert_raw(mouse_msats)
(out < HHC(genotypes, reps = 100, CI = 0.95))

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