scoreKmers: Function calculates the Z-score for each k-mer based on the...
In kmeRtone: Multi-Purpose and Flexible k-Meric Enrichment Analysis Software
scoreKmers R Documentation
Function calculates the Z-score for each k-mer based on the observed
case counts and expected case counts under the null hypothesis.
Description
Function calculates the Z-score for each k-mer based on the observed
case counts and expected case counts under the null hypothesis.
Usage
scoreKmers(kmer.table)
Arguments
kmer.table
A data.table containing k-mer counts, where each row represents a
k-mer and columns "case" and "control" represent the counts in case and control samples respectively.
Value
A modified version of the input kmer.table with an additional column
"z" containing the calculated Z-scores for each k-mer.
kmeRtone documentation built on Sept. 11, 2024, 9:12 p.m.
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| scoreKmers | R Documentation |
Function calculates the Z-score for each k-mer based on the observed case counts and expected case counts under the null hypothesis.
Description
Function calculates the Z-score for each k-mer based on the observed case counts and expected case counts under the null hypothesis.
Usage
scoreKmers(kmer.table)
Arguments
kmer.table |
A data.table containing k-mer counts, where each row represents a k-mer and columns "case" and "control" represent the counts in case and control samples respectively. |
Value
A modified version of the input kmer.table with an additional column
"z" containing the calculated Z-scores for each k-mer.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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