splitFASTA: Split a FASTA file by header.
In kmeRtone: Multi-Purpose and Flexible k-Meric Enrichment Analysis Software
splitFASTA R Documentation
Split a FASTA file by header.
Description
The first non-space word in the header will be used as the file name.
Usage
splitFASTA(fasta.file, output.dir = "./")
Arguments
fasta.file
A path to a FASTA file.
output.dir
A path to save the output results. Default is current working directory.
Details
data.table::fread is not built for reading in chunks. The developers expect
skip and nrow arguments to be in a small number. Large number slows the
reading a bit.
Value
A splitted fasta files by its headers.
kmeRtone documentation built on Sept. 11, 2024, 9:12 p.m.
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| splitFASTA | R Documentation |
Split a FASTA file by header.
Description
The first non-space word in the header will be used as the file name.
Usage
splitFASTA(fasta.file, output.dir = "./")
Arguments
fasta.file |
A path to a FASTA file. |
output.dir |
A path to save the output results. Default is current working directory. |
Details
data.table::fread is not built for reading in chunks. The developers expect skip and nrow arguments to be in a small number. Large number slows the reading a bit.
Value
A splitted fasta files by its headers.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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