contrast_matrix: Create contrast matrix

In mashr: Multivariate Adaptive Shrinkage

Create contrast matrix

Description

Create contrast matrix

Usage

contrast_matrix(R, ref, name = 1:R)

Arguments

R	the number of column for the contrast matrix
ref	the reference group. It could be a number between 1,..., R, R is number of conditions, or the name of reference group. If there is no reference group, it can be the string 'mean'.
name	a length R vector contains the name for conditions

Examples

contrast_matrix(5, 'mean')

mashr documentation built on Oct. 18, 2023, 5:08 p.m.