| Global functions | |
|---|---|
| .EMCSimard | Source code |
| .EMCadsorption | Source code |
| .EMCdesorption | Source code |
| .Egamma | Source code |
| .Egammainv | Source code |
| .LAIdistribution | Source code |
| .LAIdistributionVectors | Source code |
| .LAIprofile | Source code |
| .LAIprofileVectors | Source code |
| .averageByLAISpecies | Source code |
| .averageBySpecies | Source code |
| .averageSubdailyBySpecies | Source code |
| .betacf | Source code |
| .checkSpeciesParameters | Source code |
| .cloneInput | Source code |
| .createCutShrubTable | Source code |
| .createCutTreeTable | Source code |
| .createDeadShrubTable | Source code |
| .createDeadTreeTable | Source code |
| .createShrubTable | Source code |
| .createTreeTable | Source code |
| .criticalFirelineIntensity | Source code |
| .defineASPWBDailyOutput | Source code |
| .defineGrowthDailyOutput | Source code |
| .defineSPWBDailyOutput | Source code |
| .dominantTreeDiameter | Source code |
| .dominantTreeHeight | Source code |
| .droughtstress_sim | Source code |
| .extractSubdaily | Source code |
| .fillASPWBDailyOutput | Source code |
| .fillGrowthDailyOutput | Source code |
| .fillSPWBDailyOutput | Source code |
| .firehaz_sim | Source code |
| .forest_plot_choices | Source code |
| .fuelConditions | Source code |
| .gammds | Source code |
| .gammln | Source code |
| .gdd | Source code |
| .getCohortBiomassBalanceGROWTHPlotTypes | Source code |
| .getDailyGROWTHPlotTypes | Source code |
| .getDailyPWBPlotTypes | Source code |
| .getDailySPWBPlotTypes | Source code |
| .getEnergyPlotTypes | Source code |
| .getGrowthMortalityGROWTHPlotTypes | Source code |
| .getLabileGROWTHPlotTypes | Source code |
| .getPlantPlotTypes | Source code |
| .getSoilPlotTypes | Source code |
| .getStandPlotTypes | Source code |
| .getStructuralGROWTHPlotTypes | Source code |
| .getSubdailyEnergyBalancePlotTypes | Source code |
| .getSubdailyGROWTHPlotTypes | Source code |
| .getSubdailyLabilePlotTypes | Source code |
| .getSubdailyPlantPlotTypes | Source code |
| .getSubdailySPWBPlotTypes | Source code |
| .getSubdailySoilPlotTypes | Source code |
| .getSubdailySunlitShadePlotTypes | Source code |
| .getSunlitShadePlotTypes | Source code |
| .getUniqueDailyGROWTHPlotTypes | Source code |
| .getUniqueFORDYNPlotTypes | Source code |
| .getWaterBalancePlotTypes | Source code |
| .getWeatherDates | Source code |
| .getYLab | Source code |
| .growthInput | Source code |
| .hartBeckingIndex | Source code |
| .hydrology_interceptionGashDay | Source code |
| .hydrology_interceptionLiuDay | Source code |
| .incbeta | Source code |
| .invincgam | Source code |
| .layerCohortFuelLoading | Source code |
| .layerFuelAverageCrownLength | Source code |
| .layerFuelAverageParameter | Source code |
| .layerFuelAverageSpeciesParameter | Source code |
| .layerFuelLoading | Source code |
| .layerLAI | Source code |
| .mergeVectorOfMatrices | Source code |
| .modifyInputParam | Source code |
| .modifySoilLayerParam | Source code |
| .multiple_dynamics | Source code |
| .multiple_dynamics_range | Source code |
| .multiple_dynamics_subdaily | Source code |
| .multiple_dynamics_subdaily_sunlit_shade | Source code |
| .multiple_subday_dynamics | Source code |
| .multiple_subday_dynamics_sunlit_shade | Source code |
| .multiple_x | Source code |
| .multiple_y | Source code |
| .multiplyInputParam | Source code |
| .nextYearForest | Source code |
| .onAttach | Source code |
| .parExtinctionProfile | Source code |
| .paramsBelow | Source code |
| .parcohort | Source code |
| .parheight | Source code |
| .plot_biomass | Source code |
| .plot_carbon | Source code |
| .plot_energybalance | Source code |
| .plot_plant_om | Source code |
| .plot_plant_om_sum | Source code |
| .plot_soil | Source code |
| .plot_stand | Source code |
| .plot_temperature | Source code |
| .plot_wb | Source code |
| .plotsubdaily | Source code |
| .quadraticMeanTreeDiameter | Source code |
| .resistances_sim | Source code |
| .rootDistribution | Source code |
| .rootDistributionComplete | Source code |
| .root_ldrZ50 | Source code |
| .shelteredMidflameWindSpeed | Source code |
| .shinyplot_day | Source code |
| .shinyplot_sim | Source code |
| .shrubCover | Source code |
| .shrubCrownRatio | Source code |
| .shrubPhytovolume | Source code |
| .single_dynamics | Source code |
| .single_subday_dynamics | Source code |
| .speciesCharacterParameterFromSpIndex | Source code |
| .speciesNumericParameterFromSpIndex | Source code |
| .spwbInput | Source code |
| .sumBySpecies | Source code |
| .sumSubdailyBySpecies | Source code |
| .summarizeCohorts | Source code |
| .summarizeSpecies | Source code |
| .summarizeStand | Source code |
| .summarysim | Source code |
| .swrExtinctionProfile | Source code |
| .swrheight | Source code |
| .temporalSummary | Source code |
| .treeBasalArea | Source code |
| .unshelteredMidflameWindSpeed | Source code |
| .updateBelow | Source code |
| .windExtinctionProfile | Source code |
| .windSpeedAtCanopyHeight | Source code |
| .windSpeedAtHeightOverCanopy | Source code |
| .woodyFuelProfile | Source code |
| .wue_sim | Source code |
| SFM_metric | Man page |
| SpParams | Man page |
| SpParamsDefinition | Man page |
| SpParamsMED | Man page |
| aspwb | Man page Source code |
| aspwbInput | Man page Source code |
| aspwb_day | Man page Source code |
| aspwb_day_inner | Man page Source code |
| biophysics | Man page |
| biophysics_irradianceToPhotonFlux | Man page Source code |
| biophysics_leafTemperature | Man page Source code |
| biophysics_leafTemperature2 | Man page Source code |
| biophysics_leafVapourPressure | Man page Source code |
| biophysics_radiationDiurnalPattern | Man page Source code |
| biophysics_temperatureDiurnalPattern | Man page Source code |
| biophysics_waterDynamicViscosity | Man page Source code |
| carbon | Man page |
| carbon_carbonCompartments | Man page Source code |
| carbon_leafStarchCapacity | Man page Source code |
| carbon_leafStructuralBiomass | Man page Source code |
| carbon_osmoticWaterPotential | Man page Source code |
| carbon_relativeSapViscosity | Man page Source code |
| carbon_sapwoodStarchCapacity | Man page Source code |
| carbon_sapwoodStructuralBiomass | Man page Source code |
| carbon_sapwoodStructuralLivingBiomass | Man page Source code |
| carbon_sugarConcentration | Man page Source code |
| carbon_sugarStarchDynamicsLeaf | Man page Source code |
| carbon_sugarStarchDynamicsStem | Man page Source code |
| communication | Man page |
| copy_model_output | Man page Source code |
| defaultControl | Man page Source code |
| defaultManagementArguments | Man page Source code |
| defaultManagementFunction | Man page Source code |
| defaultSoilParams | Man page Source code |
| droughtStress | Man page Source code |
| emptyforest | Man page Source code |
| evaluation | Man page |
| evaluation_metric | Man page Source code |
| evaluation_plot | Man page Source code |
| evaluation_stats | Man page Source code |
| evaluation_table | Man page Source code |
| exampleforest | Man page |
| exampleforest2 | Man page |
| examplemeteo | Man page |
| exampleobs | Man page |
| extract | Man page Source code |
| fireHazard | Man page Source code |
| fire_FCCS | Man page Source code |
| fire_Rothermel | Man page Source code |
| fire_barkThermalDiffusivity | Man page Source code |
| fire_behaviour | Man page |
| fire_leafThermalFactor | Man page Source code |
| fire_necrosisCriticalTemperature | Man page Source code |
| fire_necrosisHeight | Man page Source code |
| fire_plumeTemperature | Man page Source code |
| fire_radialBoleNecrosis | Man page Source code |
| fire_severity | Man page |
| fordyn | Man page Source code |
| forest | Man page |
| forest2aboveground | Man page Source code |
| forest2belowground | Man page Source code |
| forest2growthInput | Man page Source code |
| forest2spwbInput | Man page Source code |
| forest_mapShrubTable | Man page Source code |
| forest_mapTreeTable | Man page Source code |
| forest_mapWoodyTables | Man page Source code |
| forest_mergeShrubs | Man page Source code |
| forest_mergeTrees | Man page Source code |
| forest_reduceToDominant | Man page Source code |
| forest_simplification | Man page |
| fuel_FCCS | Man page Source code |
| fuel_properties | Man page |
| fuel_stratification | Man page Source code |
| fuel_windAdjustmentFactor | Man page Source code |
| general_communication_structures | Man page Source code |
| growth | Man page Source code |
| growthInput | Man page Source code |
| growth_day | Man page Source code |
| growth_day_inner | Man page Source code |
| herb_LAI | Man page Source code |
| herb_foliarBiomass | Man page Source code |
| herb_fuelLoading | Man page Source code |
| herb_values | Man page |
| hydraulics_E2psiAboveground | Man page Source code |
| hydraulics_E2psiBelowground | Man page Source code |
| hydraulics_E2psiNetwork | Man page Source code |
| hydraulics_E2psiTwoElements | Man page Source code |
| hydraulics_E2psiVanGenuchten | Man page Source code |
| hydraulics_E2psiXylem | Man page Source code |
| hydraulics_E2psiXylemUp | Man page Source code |
| hydraulics_ECrit | Man page Source code |
| hydraulics_EVanGenuchten | Man page Source code |
| hydraulics_EXylem | Man page Source code |
| hydraulics_K2Psi | Man page Source code |
| hydraulics_averagePsi | Man page Source code |
| hydraulics_averageRhizosphereResistancePercent | Man page Source code |
| hydraulics_conductancefunctions | Man page |
| hydraulics_correctConductanceForViscosity | Man page Source code |
| hydraulics_defoliation | Man page |
| hydraulics_findRhizosphereMaximumConductance | Man page Source code |
| hydraulics_initSperryNetworks | Man page Source code |
| hydraulics_maximumSoilPlantConductance | Man page Source code |
| hydraulics_maximumStemHydraulicConductance | Man page Source code |
| hydraulics_proportionDefoliationSigmoid | Man page Source code |
| hydraulics_proportionDefoliationWeibull | Man page Source code |
| hydraulics_psi2K | Man page Source code |
| hydraulics_psi2Weibull | Man page Source code |
| hydraulics_psiCrit | Man page Source code |
| hydraulics_referenceConductivityHeightFactor | Man page Source code |
| hydraulics_regulatedPsiTwoElements | Man page Source code |
| hydraulics_regulatedPsiXylem | Man page Source code |
| hydraulics_rootxylemConductanceProportions | Man page Source code |
| hydraulics_scalingconductance | Man page |
| hydraulics_soilPlantResistancesSigmoid | Man page Source code |
| hydraulics_soilPlantResistancesWeibull | Man page Source code |
| hydraulics_supplyFunctionAboveground | Man page Source code |
| hydraulics_supplyFunctionBelowground | Man page Source code |
| hydraulics_supplyFunctionNetwork | Man page Source code |
| hydraulics_supplyFunctionOneXylem | Man page Source code |
| hydraulics_supplyFunctionPlot | Man page Source code |
| hydraulics_supplyFunctionThreeElements | Man page Source code |
| hydraulics_supplyFunctionTwoElements | Man page Source code |
| hydraulics_supplyfunctions | Man page |
| hydraulics_taperFactorSavage | Man page Source code |
| hydraulics_terminalConduitRadius | Man page Source code |
| hydraulics_vanGenuchtenConductance | Man page Source code |
| hydraulics_vulnerabilityCurvePlot | Man page Source code |
| hydraulics_xylemConductance | Man page Source code |
| hydraulics_xylemConductanceSigmoid | Man page Source code |
| hydraulics_xylemPsi | Man page Source code |
| hydrology_herbaceousTranspiration | Man page Source code |
| hydrology_infiltration | Man page |
| hydrology_infiltrationAmount | Man page Source code |
| hydrology_infiltrationBoughton | Man page Source code |
| hydrology_infiltrationGreenAmpt | Man page Source code |
| hydrology_infiltrationRepartition | Man page Source code |
| hydrology_interception | Man page |
| hydrology_interceptionPlot | Man page Source code |
| hydrology_rainInterception | Man page Source code |
| hydrology_rainfallIntensity | Man page Source code |
| hydrology_snowMelt | Man page Source code |
| hydrology_soilEvaporation | Man page Source code |
| hydrology_soilEvaporationAmount | Man page Source code |
| hydrology_soilWaterBalance | Man page Source code |
| hydrology_verticalInputs | Man page |
| hydrology_waterInputs | Man page Source code |
| initSureauNetworks | Man page Source code |
| instance_communication_structures | Man page Source code |
| light_PARcohort | Man page Source code |
| light_PARground | Man page Source code |
| light_SWRground | Man page Source code |
| light_advanced | Man page |
| light_basic | Man page |
| light_cohortAbsorbedSWRFraction | Man page Source code |
| light_cohortSunlitShadeAbsorbedRadiation | Man page Source code |
| light_directionalExtinctionCoefficient | Man page Source code |
| light_instantaneousLightExtinctionAbsortion | Man page Source code |
| light_layerDiffuseIrradianceFraction | Man page Source code |
| light_layerDirectIrradianceFraction | Man page Source code |
| light_layerSunlitFraction | Man page Source code |
| light_leafAngleBetaParameters | Man page Source code |
| light_leafAngleCDF | Man page Source code |
| light_longwaveRadiationSHAW | Man page Source code |
| medfate | Man page |
| medfate-package | Man page |
| modelInput | Man page |
| modifyCohortParams | Man page Source code |
| modifyInputParams | Man page Source code |
| modifyParams | Man page |
| modifySpParams | Man page Source code |
| moisture | Man page |
| moisture_apoplasticPsi | Man page Source code |
| moisture_apoplasticRWC | Man page Source code |
| moisture_leafWaterCapacity | Man page Source code |
| moisture_pressureVolumeCurvePlot | Man page Source code |
| moisture_sapwoodWaterCapacity | Man page Source code |
| moisture_symplasticPsi | Man page Source code |
| moisture_symplasticRWC | Man page Source code |
| moisture_tissueRWC | Man page Source code |
| moisture_turgorLossPoint | Man page Source code |
| mortality_dailyProbability | Man page Source code |
| multiple_runs | Man page Source code |
| optimization | Man page |
| optimization_evaluation_function | Man page Source code |
| optimization_evaluation_multicohort_function | Man page Source code |
| optimization_function | Man page Source code |
| optimization_multicohort_function | Man page Source code |
| pheno_leafDevelopmentStatus | Man page Source code |
| pheno_leafSenescenceStatus | Man page Source code |
| pheno_updateLeaves | Man page Source code |
| pheno_updatePhenology | Man page Source code |
| photo | Man page |
| photo_GammaTemp | Man page Source code |
| photo_JmaxTemp | Man page Source code |
| photo_KmTemp | Man page Source code |
| photo_VmaxTemp | Man page Source code |
| photo_electronLimitedPhotosynthesis | Man page Source code |
| photo_leafPhotosynthesisFunction | Man page Source code |
| photo_leafPhotosynthesisFunction2 | Man page Source code |
| photo_multilayerPhotosynthesisFunction | Man page Source code |
| photo_photosynthesis | Man page Source code |
| photo_photosynthesisBaldocchi | Man page Source code |
| photo_rubiscoLimitedPhotosynthesis | Man page Source code |
| photo_sunshadePhotosynthesisFunction | Man page Source code |
| plant_ID | Man page Source code |
| plant_LAI | Man page Source code |
| plant_basalArea | Man page Source code |
| plant_characterParameter | Man page Source code |
| plant_cover | Man page Source code |
| plant_crownBaseHeight | Man page Source code |
| plant_crownLength | Man page Source code |
| plant_crownRatio | Man page Source code |
| plant_density | Man page Source code |
| plant_equilibriumLeafLitter | Man page Source code |
| plant_equilibriumSmallBranchLitter | Man page Source code |
| plant_foliarBiomass | Man page Source code |
| plant_fuelLoading | Man page Source code |
| plant_height | Man page Source code |
| plant_individualArea | Man page Source code |
| plant_largerTreeBasalArea | Man page Source code |
| plant_parameter | Man page Source code |
| plant_phytovolume | Man page Source code |
| plant_species | Man page Source code |
| plant_speciesName | Man page Source code |
| plant_values | Man page |
| plant_water | Man page Source code |
| plot.fordyn | Man page Source code |
| plot.forest | Man page Source code |
| plot.growth | Man page Source code |
| plot.growth_day | Man page Source code |
| plot.pwb | Man page Source code |
| plot.pwb_day | Man page Source code |
| plot.spwb | Man page Source code |
| plot.spwb_day | Man page Source code |
| poblet_trees | Man page |
| print.summary.forest | Man page Source code |
| pwb | Man page Source code |
| regeneration | Man page |
| regeneration_recruitment | Man page Source code |
| regeneration_resprouting | Man page Source code |
| regeneration_seedmortality | Man page Source code |
| regeneration_seedproduction | Man page Source code |
| regeneration_seedrefill | Man page Source code |
| resetInputs | Man page Source code |
| resistances | Man page Source code |
| root | Man page |
| root_coarseRootLengths | Man page Source code |
| root_coarseRootLengthsFromVolume | Man page Source code |
| root_coarseRootSoilVolume | Man page Source code |
| root_coarseRootSoilVolumeFromConductance | Man page Source code |
| root_conicDistribution | Man page Source code |
| root_fineRootAreaIndex | Man page Source code |
| root_fineRootBiomass | Man page Source code |
| root_fineRootHalfDistance | Man page Source code |
| root_fineRootRadius | Man page Source code |
| root_fineRootSoilVolume | Man page Source code |
| root_horizontalProportions | Man page Source code |
| root_individualRootedGroundArea | Man page Source code |
| root_ldrDistribution | Man page Source code |
| root_rhizosphereMaximumConductance | Man page Source code |
| root_specificRootSurfaceArea | Man page Source code |
| semi_implicit_integration | Man page Source code |
| shinyplot | Man page Source code |
| shinyplot.fordyn | Man page Source code |
| shinyplot.forest | Man page Source code |
| shinyplot.growth | Man page Source code |
| shinyplot.growth_day | Man page Source code |
| shinyplot.pwb | Man page Source code |
| shinyplot.pwb_day | Man page Source code |
| shinyplot.spwb | Man page Source code |
| shinyplot.spwb_day | Man page Source code |
| shrub2forest | Man page Source code |
| soil | Man page Source code |
| soil_USDAType | Man page Source code |
| soil_campbellParamsClappHornberger | Man page Source code |
| soil_capacitance | Man page Source code |
| soil_conductivity | Man page Source code |
| soil_psi | Man page Source code |
| soil_psi2cVG | Man page Source code |
| soil_psi2kVG | Man page Source code |
| soil_psi2thetaSX | Man page Source code |
| soil_psi2thetaVG | Man page Source code |
| soil_redefineLayers | Man page Source code |
| soil_retentionCurvePlot | Man page Source code |
| soil_rockWeight2Volume | Man page Source code |
| soil_saturatedConductivitySX | Man page Source code |
| soil_saturatedWaterDepth | Man page Source code |
| soil_temperatureChange | Man page Source code |
| soil_temperatureGradient | Man page Source code |
| soil_texture | Man page |
| soil_thermalCapacity | Man page Source code |
| soil_thermalConductivity | Man page Source code |
| soil_thermodynamics | Man page |
| soil_theta | Man page Source code |
| soil_theta2psiSX | Man page Source code |
| soil_theta2psiVG | Man page Source code |
| soil_thetaFC | Man page Source code |
| soil_thetaSAT | Man page Source code |
| soil_thetaSATSX | Man page Source code |
| soil_thetaWP | Man page Source code |
| soil_unsaturatedConductivitySX | Man page Source code |
| soil_vanGenuchtenParamsCarsel | Man page Source code |
| soil_vanGenuchtenParamsToth | Man page Source code |
| soil_water | Man page Source code |
| soil_waterExtractable | Man page Source code |
| soil_waterFC | Man page Source code |
| soil_waterPsi | Man page Source code |
| soil_waterSAT | Man page Source code |
| soil_waterWP | Man page Source code |
| species_LAI | Man page Source code |
| species_basalArea | Man page Source code |
| species_characterParameter | Man page Source code |
| species_cover | Man page Source code |
| species_density | Man page Source code |
| species_foliarBiomass | Man page Source code |
| species_fuelLoading | Man page Source code |
| species_parameter | Man page Source code |
| species_values | Man page |
| spwb | Man page Source code |
| spwbInput | Man page Source code |
| spwb_day | Man page Source code |
| spwb_day_inner | Man page Source code |
| stand_LAI | Man page Source code |
| stand_basalArea | Man page Source code |
| stand_dominantTreeDiameter | Man page Source code |
| stand_dominantTreeHeight | Man page Source code |
| stand_dominantTreeSpecies | Man page Source code |
| stand_foliarBiomass | Man page Source code |
| stand_fuelLoading | Man page Source code |
| stand_hartBeckingIndex | Man page Source code |
| stand_meanTreeHeight | Man page Source code |
| stand_quadraticMeanTreeDiameter | Man page Source code |
| stand_shrubVolume | Man page Source code |
| stand_treeDensity | Man page Source code |
| stand_values | Man page |
| summary.fordyn | Man page Source code |
| summary.forest | Man page Source code |
| summary.growth | Man page Source code |
| summary.pwb | Man page Source code |
| summary.soil | Man page Source code |
| summary.spwb | Man page Source code |
| sureau_ecos | Man page |
| trait_family_means | Man page |
| transp_maximumTranspirationModel | Man page Source code |
| transp_modes | Man page |
| transp_profitMaximization | Man page Source code |
| transp_stomatalRegulationPlot | Man page Source code |
| transp_stomatalregulation | Man page |
| transp_transpirationGranier | Man page Source code |
| transp_transpirationSperry | Man page Source code |
| transp_transpirationSureau | Man page Source code |
| tree2forest | Man page Source code |
| utils_ldrExploration | Man page Source code |
| utils_ldrOptimization | Man page Source code |
| utils_rockOptimization | Man page Source code |
| vprofile_PARExtinction | Man page Source code |
| vprofile_SWRExtinction | Man page Source code |
| vprofile_fuelBulkDensity | Man page Source code |
| vprofile_leafAreaDensity | Man page Source code |
| vprofile_rootDistribution | Man page Source code |
| vprofile_windExtinction | Man page Source code |
| waterUseEfficiency | Man page Source code |
| wind | Man page |
| wind_canopyTurbulence | Man page Source code |
| wind_canopyTurbulenceModel | Man page Source code |
| woodformation | Man page |
| woodformation_growRing | Man page Source code |
| woodformation_initRing | Man page Source code |
| woodformation_relativeExpansionRate | Man page Source code |
| woodformation_relativeGrowthRate | Man page Source code |
| woodformation_temperatureEffect | Man page Source code |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.