Man pages for mineCitrus
Extract and Analyze Median Molecule Intensity from 'citrus' Output
| allmeds | Gets matrices of medians for each individual sample for all... |
| citrus.combinedFCSSet | Cytometry data set for example of Citrus data set from... |
| citrus.foldClustering | Clustering data for example of Citrus data set from... |
| citrus.foldFeatureSet | Correlation data for example of Citrus data set from... |
| classclustermeds | Gets matrices of medians for each individual sample for all... |
| clustermeds | Gets matrix of medians for desired measured features for all... |
| difMarkerPlots | Plot dot plots of features where both clusters are... |
| difMarkerPlots2 | Plot dot plots of features where one cluster is significantly... |
| filterMarker | Filters list of data matrices with columns corresponding to... |
| findclust | Filters list to contain only desired clusters |
| findSig | Assesses significance of ANOVA and t-test results |
| plotdif | Plot dot plots of features where both clusters are... |
| plotdif2 | Plot dot plots of features where one cluster is significantly... |
| posthoc | Runs ANOVA and t-tests comparing clusters and markers in... |
| processforanova | Processes cluster signaling data in form for statistical... |
| sortmat | Reorders to rows (corresponding to different clusters) of a... |
