processforanova: Processes cluster signaling data in form for statistical...

In mineCitrus: Extract and Analyze Median Molecule Intensity from 'citrus' Output

Description

Processes cluster signaling data in form for statistical analysis

Usage

processforanova(filtereddata)

Arguments

filtereddata

a list with each element corresonding to a cluster of interest and matrices containing individual sample data for desired markers

Value

A dataframe sufficient for using the posthoc function to compute statistics

Examples

library(mineCitrus)
data("citrus.combinedFCSSet")
data("citrus.foldClustering")
data("citrus.foldFeatureSet")
meds<-allmeds(citrus.combinedFCSSet=citrus.combinedFCSSet,
              citrus.foldClustering=citrus.foldClustering,
              citrus.foldFeatureSet=citrus.foldFeatureSet)
filteredmeds<-findclust(data=meds,clusters=c(19999,19972,19988))
foranova<-processforanova(filtereddata=filteredmeds)

mineCitrus documentation built on May 2, 2019, 1:27 p.m.