Description Usage Arguments Value Examples
Runs ANOVA and t-tests comparing clusters and markers in clusters
1 | posthoc(processedDat, clustIDdif)
|
processedDat |
data that has been processed using the processforanova function |
clustIDdif |
ID number of the cluster to compare the others to |
A list of t-test results for each of the comparisons
1 2 3 4 5 6 7 8 9 10 11 | library(mineCitrus)
data("citrus.combinedFCSSet")
data("citrus.foldClustering")
data("citrus.foldFeatureSet")
meds<-allmeds(citrus.combinedFCSSet=citrus.combinedFCSSet,
citrus.foldClustering=citrus.foldClustering,
citrus.foldFeatureSet=citrus.foldFeatureSet)
filteredmeds<-findclust(data=meds,clusters=c(19999,19972,19988))
meds2<-filterMarker(clustdat=filteredmeds,markers=c(2,3))
foranova<-processforanova(filtereddata=meds2)
ttests<-posthoc(processedDat=foranova,clustIDdif=19999)
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