gsummary: Calculates summary statistics of track expression

In misha: Toolkit for Analysis of Genomic Data

Calculates summary statistics of track expression

Description

Calculates summary statistics of track expression.

Usage

gsummary(expr = NULL, intervals = NULL, iterator = NULL, band = NULL)

Arguments

expr	track expression
intervals	genomic scope for which the function is applied
iterator	track expression iterator. If 'NULL' iterator is determined implicitly based on track expression.
band	track expression band. If 'NULL' no band is used.

Details

This function returns summary statistics of a track expression: total number of bins, total number of bins whose value is NaN, min, max, sum, mean and standard deviation of the values.

Value

An array that represents summary statistics.

See Also

gintervals.summary, gbins.summary

Examples

gdb.init_examples()
gsummary("rects_track")

misha documentation built on Sept. 14, 2023, 5:08 p.m.