Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Plot a summary diagram for argo data.
 ## S4 method for signature 'argo'
(x, = 1, level, coastline = ("best",
"coastlineWorld", "coastlineWorldMedium", "coastlineWorldFine", "none"),
cex = 1, = 1, = "p", , fill = , adorn = ,
projection = , mgp = ("oceMgp"), mar = (mgp[1] + 1.5,
mgp[1] + 1.5, 1.5, 1.5), tformat, = ("oceDebug"), )

x 
object inheriting from argoclass .

which 
list of desired plot types, one of the following. Note
that oce.pmatch is used to try to complete partial
character matches, and that an error will occur if the match is
not complete (e.g. "salinity" matches to both
"salinity ts" and "salinity profile" .).

which=1 or which="trajectory" gives a
plot of the argo trajectory, with the coastline, if one is provided.

which=2 or "salinity ts" gives a time series of
salinity at the indicated level(s)

which=3 or "temperature ts" gives a time series
of temperature at the indicated level(s)

which=4 or "TS" gives a TS diagram at the
indicated level(s)

which=5 or "salinity profile" gives a salinity
profile of all the data (with S and p trimmed to the 1 and 99
percentiles)

which=6 or "temperature profile" gives a
temperature profile (with T and p trimmed to the 1 and 99
percentiles)

level 
depth pseudolevel to plot, for which=2 and higher. May be an
integer, in which case it refers to an index of depth (1 being the top)
or it may be the string "all" which means to plot all data.

coastline 
character string giving the coastline to be used in an Argolocation
map, or "best" to pick the one with highest resolution, or
"none" to avoid drawing the coastline.

cex 
size of plotting symbols to be used if type='p' .

pch 
type of plotting symbols to be used if type='p' .

type 
plot type, either "l" or "p" .

col 
optional list of colours for plotting.

fill 
Either a logical, indicating whether to fill the land with
lightgray, or a colour name. Owing to problems with some projections, the
default is not to fill.

adorn 
(Defunct)
An expression or vector of expressions that contain
R code that is to be executed immediately after each panel of the plot.
If the number of expressions matches the number of panels, then the
expressions are used for the corresponding panels; otherwise, the
expression list is extended to match the number of panels (i.e.
to obtain length(which) elements). Note that adorn
is a dangerous argument, because if the expressions contained
therein set up local storage, there is a chance of entirely
disrupting the plotting. For this reason, adorn was
marked as defunct in June 2016, and will be removed entirely
after the July CRAN release. Users with existing code that uses
adorn should simply plot the panels individually, and
use conventional R functions, e.g. lines etc.,
after each panel, to achieve the desired effect. (See
ocedefunct for notes on other deprecated or
defunct oce features.)

projection 
indication of the projection to be used
in trajetory maps. If this is NULL , no projection is used, although
the plot aspect ratio will be set to yield zero shape distortion at the
mean float latitude. If projection="automatic" , then one
of two projections is used: stereopolar (i.e. "+proj=stere +lon_0=X"
where X is the mean longitude), or Mercator (i.e. "+proj=merc" )
otherwise. Otherwise, projection must be a character string specifying
a projection in the notation used by project in the rgdal;
this will be familiar to many readers as the PROJ.4 notation;
see mapPlot .

mgp 
3element numerical vector to use for par(mgp) , and also for
par(mar) , computed from this. The default is tighter than the R
default, in order to use more space for the data and less for the axes.

mar 
value to be used with par ("mar").

tformat 
optional argument passed to oce.plot.ts , for plot
types that call that function. (See strptime for the format
used.)

debug 
debugging flag.

... 
optional arguments passed to plotting functions.

None.
Dan Kelley
http://www.argo.ucsd.edu/
Other things related to argo
data: [[,argomethod
,
[[<,argomethod
, argoclass
,
argoGrid
, argoNames2oceNames
,
argo
, as.argo
,
handleFlags,argomethod
,
read.argo
,
subset,argomethod
,
summary,argomethod
Other functions that plot oce
data: plot,adpmethod
,
plot,advmethod
,
plot,amsrmethod
,
plot,bremenmethod
,
plot,cmmethod
,
plot,coastlinemethod
,
plot,ctdmethod
,
plot,gpsmethod
,
plot,ladpmethod
,
plot,lisstmethod
,
plot,lobomethod
,
plot,metmethod
,
plot,odfmethod
,
plot,rskmethod
,
plot,satellitemethod
,
plot,sealevelmethod
,
plot,sectionmethod
,
plot,tidemmethod
,
plot,topomethod
,
plot,windrosemethod
,
plotProfile
, plotScan
,
plotTS
, tidemclass
oce documentation built on May 29, 2017, 12:19 p.m.