Files in omopgenerics

Methods and Classes for the OMOP Common Data Model

README.md R/cohortCodelist.R R/assert.R R/exportCodelist.R R/classOmopTable.R R/classAchillesTable.R R/summary.R R/methodSuppress.R R/methodBind.R R/compute.R R/utilities.R R/recordCohortAttrition.R R/classCdmTable.R R/importCodelist.R R/methodAttrition.R R/methodParticipants.R R/classCdmReference.R R/methodListSourceTables.R R/cohortCount.R R/exportConceptSetExpression.R R/casting.R R/classSummarisedResult.R R/combineStrata.R R/classCdmSource.R R/classCodelistWithDetails.R R/methodDropSourceTable.R R/methodDropTable.R R/exportSummarisedResult.R R/OMOPGenerics-package.R R/classCodelist.R R/arrange.R R/methodInsertFromSource.R R/methodSettings.R R/methodCdmTableFromSource.R R/importConceptSetExpression.R R/importSummarisedResult.R R/methodReadSourceTable.R R/validate.R R/cdmSelect.R R/cdmFromTables.R R/methodInsertTable.R R/classConceptSetExpression.R R/overwriteClasses.R R/classCohortTable.R inst/doc/cdm_reference.Rmd inst/doc/codelists.R inst/doc/cdm_reference.R inst/doc/summarised_result.R inst/doc/summarised_result.Rmd inst/doc/cohorts.Rmd inst/doc/reexport.Rmd inst/doc/reexport.R inst/doc/codelists.Rmd inst/doc/cohorts.R tests/testthat.R tests/testthat/test-recordCohortAttrition.R tests/testthat/test-exportConceptSetExpression.R tests/testthat/test-validate.R tests/testthat/test-methodSuppress.R tests/testthat/test-importCodelist.R tests/testthat/test-importConceptSetExpression.R tests/testthat/test-classCodelist.R tests/testthat/test-classCohortTable.R tests/testthat/test-methodComputeTable.R tests/testthat/test-classCdmSource.R tests/testthat/test-exportSummarisedResult.R tests/testthat/test-prefix.R tests/testthat/test-cohortCodelist.R tests/testthat/test-classCdmReference.R tests/testthat/test-classCodelistWithDetails.R tests/testthat/test-combineStrata.R tests/testthat/test-methodInsertTable.R tests/testthat/test-importSummarisedResult.R tests/testthat/test-methodInsertFromSource.R tests/testthat/test-utilities.R tests/testthat/test-emptyObjects.R tests/testthat/test-cdmFromTables.R tests/testthat/test-overwriteClasses.R tests/testthat/test-classLocalSource.R tests/testthat/test-methodGetCdmSource.R tests/testthat/test-exportCodelist.R tests/testthat/test-classSummarisedResult.R tests/testthat/test-methodReadSourceTable.R tests/testthat/test-methodParticipants.R tests/testthat/test-methodBind.R tests/testthat/test-methodSummary.R tests/testthat/test-columns.R tests/testthat/test-methodDropSourceTable.R tests/testthat/test-methodListSourceTables.R tests/testthat/test-assert.R tests/testthat/test-classConceptSetExpression.R tests/testthat/test-cdmSelect.R tests/testthat/test-casting.R tests/testthat/_snaps/utilities.md vignettes/cdm_reference.Rmd vignettes/summarised_result.Rmd vignettes/cohorts.Rmd vignettes/reexport.Rmd vignettes/codelists.Rmd man/emptyCohortTable.Rd man/bind.summarised_result.Rd man/bind.cohort_table.Rd man/attrition.cohort_table.Rd man/summary.cohort_table.Rd man/suppress.summarised_result.Rd man/compute.cdm_table.Rd man/summary.cdm_reference.Rd man/getCohortName.Rd man/omopTableFields.Rd man/cdmSelect.Rd man/cdmSource.Rd man/emptyCodelistWithDetails.Rd man/newCodelist.Rd man/assertClass.Rd man/tableSource.Rd man/achillesTables.Rd man/newCodelistWithDetails.Rd man/getPersonIdentifier.Rd man/tmpPrefix.Rd man/summary.summarised_result.Rd man/reexports.Rd man/validateResultArgument.Rd man/assertChoice.Rd man/recordCohortAttrition.Rd man/cash-.cdm_reference.Rd man/newCdmTable.Rd man/emptyOmopTable.Rd man/sourceType.Rd man/assertCharacter.Rd man/cohortTables.Rd man/newCohortTable.Rd man/uniqueId.Rd man/newOmopTable.Rd man/achillesColumns.Rd man/validateAgeGroupArgument.Rd man/newCdmSource.Rd man/emptyAchillesTable.Rd man/omopColumns.Rd man/validateConceptSetArgument.Rd man/resultColumns.Rd man/assertDate.Rd man/tableName.Rd man/assertTrue.Rd man/print.codelist.Rd man/emptySummarisedResult.Rd man/validateCohortIdArgument.Rd man/omopTables.Rd man/getCohortId.Rd man/insertTable.Rd man/listSourceTables.Rd man/newLocalSource.Rd man/emptyCodelist.Rd man/toSnakeCase.Rd man/cohortColumns.Rd man/validateResultArguemnt.Rd man/cdmSourceType.Rd man/assertLogical.Rd man/cdmVersion.Rd man/insertFromSource.Rd man/sub-subset-.cdm_reference.Rd man/newAchillesTable.Rd man/sub-sub-.cdm_reference.Rd man/cdmName.Rd man/exportConceptSetExpression.Rd man/collect.cohort_table.Rd man/cash-set-.cdm_reference.Rd man/omopgenerics-package.Rd man/estimateTypeChoices.Rd man/combineStrata.Rd man/suppress.Rd man/settings.Rd man/cdmTableFromSource.Rd man/importCodelist.Rd man/readSourceTable.Rd man/exportSummarisedResult.Rd man/validateWindowArgument.Rd man/emptyCdmReference.Rd man/validateCdmArgument.Rd man/importConceptSetExpression.Rd man/cdmReference.Rd man/newConceptSetExpression.Rd man/validateNameArgument.Rd man/print.codelist_with_details.Rd man/print.conceptSetExpression.Rd man/checkCohortRequirements.Rd man/assertTable.Rd man/bind.Rd man/validateNameLevel.Rd man/exportCodelist.Rd man/cdmFromTables.Rd man/participants.Rd man/print.cdm_reference.Rd man/newCdmReference.Rd man/newSummarisedResult.Rd man/isTableEmpty.Rd man/isResultSuppressed.Rd man/settings.cohort_table.Rd man/validateCohortArgument.Rd man/importSummarisedResult.Rd man/collect.cdm_reference.Rd man/settings.summarised_result.Rd man/cohortCount.Rd man/cohortCodelist.Rd man/attrition.Rd man/uniqueTableName.Rd man/dropTable.Rd man/dropSourceTable.Rd man/assertList.Rd man/resultPackageVersion.Rd man/assertNumeric.Rd