Pairwise recombination frequency calculation

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Description

Calculates the pairwise recombination frequencies for two given markers. Heuristic approach, assuming minimal recombination between markers.

Usage

1
pairwRF(input, ploidy = 4, na.penalty = 0)

Arguments

input

Matrix with two rows of genotypes. Each row is one marker.

ploidy

Ploidy level of the organism.

Value

Numeric value of recomination between the two markers.