extractTC: Tripeptide Composition Descriptor

Description Usage Arguments Value Author(s) References See Also Examples

View source: R/desc-03-TC.R

Description

This function calculates the Tripeptide Composition descriptor (dim: 8,000).

Usage

1

Arguments

x

A character vector, as the input protein sequence.

Value

A length 8,000 named vector

Author(s)

Nan Xiao <https://nanx.me>

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractAAC and extractDC for Amino Acid Composition and Dipeptide Composition descriptors.

Examples

1
2
x = readFASTA(system.file("protseq/P00750.fasta", package = "protr"))[[1]]
extractTC(x)

protr documentation built on Sept. 29, 2017, 9:02 a.m.