Files in protr
Generating Various Numerical Representation Schemes for Protein Sequences

NEWS.md
LICENSE
README.md
NAMESPACE
MD5
DESCRIPTION
vignettes/bioinformatics.csl
vignettes/protr.Rmd
vignettes/protr.bib
vignettes/protr.css
vignettes/figures/AAindex.png
vignettes/figures/ctriad.png
vignettes/figures/CTD.png
vignettes/figures/APAAC.png
vignettes/figures/QSO.png
vignettes/figures/roc.png
vignettes/figures/PAAC.png
vignettes/figures/protrweb.png
inst/CITATION
inst/sysdata/OptAA3d.sdf
inst/sysdata/AAidx.csv
inst/sysdata/Grantham.csv
inst/sysdata/Schneider-Wrede.csv
inst/protseq/P00750.fasta
inst/protseq/P20160.fasta
inst/protseq/align.fasta
inst/protseq/Q9NZP8.fasta
inst/protseq/extracell.fasta
inst/protseq/mitochondrion.fasta
inst/protseq/P08218.fasta
inst/protseq/4HHB.pdb
inst/protseq/P10323.fasta
inst/protseq/Plasminogen.fasta
inst/doc/protr.html
inst/doc/protr.R inst/doc/protr.Rmd
build/vignette.rds
man/AABLOSUM45.Rd man/extractProtFP.Rd man/twoSeqSim.Rd man/extractQSO.Rd man/AAConst.Rd man/AA3DMoRSE.Rd man/extractDC.Rd man/extractDescScales.Rd man/extractPAAC.Rd man/extractMDSScales.Rd man/AAWHIM.Rd man/extractCTDD.Rd man/AAGETAWAY.Rd man/extractProtFPGap.Rd man/AAPAM250.Rd man/AABurden.Rd man/extractFAScales.Rd man/protr-package.Rd man/parGOSim.Rd man/extractPSSMFeature.Rd man/extractPSSM.Rd man/AABLOSUM50.Rd man/readFASTA.Rd man/AARDF.Rd man/AAMolProp.Rd man/acc.Rd man/AAEdgeAdj.Rd man/AAGeom.Rd man/AADescAll.Rd man/twoGOSim.Rd man/AAConn.Rd man/AAPAM40.Rd man/OptAA3d.Rd man/extractBLOSUM.Rd man/AAPAM30.Rd man/AARandic.Rd man/extractGeary.Rd man/AAEigIdx.Rd man/extractCTDT.Rd man/AAWalk.Rd man/extractCTDC.Rd man/getUniProt.Rd man/extractCTDDClass.Rd man/extractCTDTClass.Rd man/extractCTriadClass.Rd man/extractScales.Rd man/AAPAM70.Rd man/AAFGC.Rd man/AAPAM120.Rd man/AA2DACOR.Rd man/AACPSA.Rd man/AATopo.Rd man/AAMOE3D.Rd man/AABLOSUM100.Rd man/extractSOCN.Rd man/extractScalesGap.Rd man/extractAPAAC.Rd man/extractMoran.Rd man/AAACF.Rd man/AAInfo.Rd man/extractTC.Rd man/extractMoreauBroto.Rd man/parSeqSim.Rd man/AATopoChg.Rd man/extractCTriad.Rd man/extractAAC.Rd man/extractCTDCClass.Rd man/AAindex.Rd man/protcheck.Rd man/AABLOSUM80.Rd man/protseg.Rd man/AABLOSUM62.Rd man/AAMetaInfo.Rd man/readPDB.Rd man/AAMOE2D.Rd man/extractPSSMAcc.Rd R/desc-05-Moran.R R/par-02-parGOSim.R R/misc-04-protseg.R R/pcm-04-extractFAScales.R R/desc-12-QSO.R R/desc-04-MoreauBroto.R R/misc-06-acc.R R/desc-07-CTDC.R R/desc-10-CTriadClass.R R/desc-15-PSSMFeature.R R/desc-10-CTriad.R R/pcm-06-extractBLOSUM.R R/desc-09-CTDD.R R/pcm-03-extractProtFP.R R/desc-15-PSSM.R R/desc-08-CTDT.R R/desc-11-SOCN.R R/desc-09-CTDDClass.R R/desc-13-PAAC.R R/pcm-01-extractScalesGap.R R/misc-05-getUniProt.R R/desc-03-TC.R R/misc-02-readPDB.R R/misc-01-readFASTA.R R/desc-15-PSSMAcc.R R/pcm-01-extractScales.R R/desc-02-DC.R R/par-01-parSeqSim.R R/protr-package.R R/desc-06-Geary.R R/desc-01-AAC.R R/desc-14-APAAC.R R/protr-datalist.R R/pcm-02-extractDescScales.R R/desc-08-CTDTClass.R R/pcm-05-extractMDSScales.R R/desc-07-CTDCClass.R R/misc-03-protcheck.R R/pcm-03-extractProtFPGap.R
data/AATopo.rda
data/AAInfo.rda
data/AARDF.rda
data/AAFGC.rda
data/AABLOSUM45.rda
data/AATopoChg.rda
data/AAWalk.rda
data/AAMetaInfo.rda
data/AAMOE2D.rda
data/AAGETAWAY.rda
data/AAACF.rda
data/AAindex.rda
data/AAMOE3D.rda
data/AA2DACOR.rda
data/AAPAM250.rda
data/AABurden.rda
data/AAPAM40.rda
data/AAEigIdx.rda
data/AAWHIM.rda
data/AARandic.rda
data/AACPSA.rda
data/AABLOSUM80.rda
data/AAConst.rda
data/AAPAM120.rda
data/AADescAll.rda
data/AAMolProp.rda
data/AAPAM30.rda
data/AABLOSUM50.rda
data/AABLOSUM62.rda
data/AAPAM70.rda
data/AA3DMoRSE.rda
data/AAEdgeAdj.rda
data/AAGeom.rda
data/AAConn.rda
data/AABLOSUM100.rda
protr documentation built on Sept. 29, 2017, 9:02 a.m.