HKL_S5F: Human kappa and lambda light chain, silent, 5-mer, functional...
In shazam: Immunoglobulin Somatic Hypermutation Analysis
HKL_S5F R Documentation
Human kappa and lambda light chain, silent, 5-mer, functional targeting model.
Description
5-mer model of somatic hypermutation targeting based on analysis of silent mutations
in functional kappa and lambda light chain Ig sequences from Homo sapiens.
Usage
HKL_S5F
Format
A TargetingModel object.
References
Cui A, Di Niro R, Vander Heiden J, Briggs A, Adams K, Gilbert T, O'Connor K,
Vigneault F, Shlomchik M and Kleinstein S (2016). A Model of Somatic Hypermutation
Targeting in Mice Based on High-Throughput Ig Sequencing Data. The Journal of
Immunology, 197(9), 3566-3574.
See Also
See HH_S5F for the human heavy chain 5-mer targeting model;
MK_RS5NF for the mouse kappa light chain 5-mer targeting model;
and U5N for the uniform 5-mer null targeting model.
shazam documentation built on Oct. 3, 2023, 1:06 a.m.
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| HKL_S5F | R Documentation |
Human kappa and lambda light chain, silent, 5-mer, functional targeting model.
Description
5-mer model of somatic hypermutation targeting based on analysis of silent mutations in functional kappa and lambda light chain Ig sequences from Homo sapiens.
Usage
HKL_S5F
Format
A TargetingModel object.
References
Cui A, Di Niro R, Vander Heiden J, Briggs A, Adams K, Gilbert T, O'Connor K, Vigneault F, Shlomchik M and Kleinstein S (2016). A Model of Somatic Hypermutation Targeting in Mice Based on High-Throughput Ig Sequencing Data. The Journal of Immunology, 197(9), 3566-3574.
See Also
See HH_S5F for the human heavy chain 5-mer targeting model; MK_RS5NF for the mouse kappa light chain 5-mer targeting model; and U5N for the uniform 5-mer null targeting model.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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