MUTATION_SCHEMES: Amino acid mutation definitions
In shazam: Immunoglobulin Somatic Hypermutation Analysis
MUTATION_SCHEMES R Documentation
Amino acid mutation definitions
Description
Definitions of replacement (R) and silent (S) mutations for different amino acid
physicochemical classes.
Format
A MutationDefinition object defining:
-
CHARGE_MUTATIONS: Amino acid mutations are defined by changes
in side chain charge class.
-
HYDROPATHY_MUTATIONS: Amino acid mutations are defined by changes
in side chain hydrophobicity class.
-
POLARITY_MUTATIONS: Amino acid mutations are defined by changes
in side chain polarity class.
-
VOLUME_MUTATIONS: Amino acid mutations are defined by changes
in side chain volume class.
References
shazam documentation built on Oct. 3, 2023, 1:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| MUTATION_SCHEMES | R Documentation |
Amino acid mutation definitions
Description
Definitions of replacement (R) and silent (S) mutations for different amino acid physicochemical classes.
Format
A MutationDefinition object defining:
-
CHARGE_MUTATIONS: Amino acid mutations are defined by changes in side chain charge class. -
HYDROPATHY_MUTATIONS: Amino acid mutations are defined by changes in side chain hydrophobicity class. -
POLARITY_MUTATIONS: Amino acid mutations are defined by changes in side chain polarity class. -
VOLUME_MUTATIONS: Amino acid mutations are defined by changes in side chain volume class.
References
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.