View source: R/ConvertNumbering.R
convertNumbering | R Documentation |
Converts numbering systems like Kabat or IMGT using these conventions: http://www.imgt.org/IMGTScientificChart/Numbering/IMGT-Kabat_part1.html with Gaps (unoccupied positions) shown by "G" and Asterisks (*) shown by "S": arbitrary mappings (multiple possible "to" values) represented with "NA"
convertNumbering(locus, from, to, calls)
locus |
string indicating heavy ("IGH") or light chains ("IGK" or "IGL) |
from |
string indicating numbering system to convert to ("IMGT" or "KABAT") |
to |
string indicating original numbering system ("IMGT" or "KABAT") |
calls |
vector of strings representing original numbering |
A vector of string indicating the corresponding numbering
convertNumbering("IGH", "IMGT", "KABAT", c("51", "23", "110"))
convertNumbering("IGH", "KABAT", "IMGT", c("51", "23", "G"))
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