tajimasD: Tajima's D
In strataG: Summaries and Population Structure Analyses of Genetic Data
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
Calculate Tajima's D for a set of sequences to test
for selection.
Usage
1
tajimasD(x, CI = 0.95)
Arguments
x
set of DNA sequences or a haploid gtypes
object with sequences.
CI
desired central confidence interval.
Value
A named vector with the estimate for D and
the p.value that it is different from 0.
Author(s)
Eric Archer eric.archer@noaa.gov
References
Tajima, F. 1989. Statistical method for testing the neutral
mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
Examples
1
2
3
strataG documentation built on Feb. 28, 2020, 9:07 a.m.
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Description Usage Arguments Value Author(s) References Examples
Description
Calculate Tajima's D for a set of sequences to test for selection.
Usage
1 | tajimasD(x, CI = 0.95)
|
Arguments
x |
set of DNA sequences or a haploid gtypes object with sequences. |
CI |
desired central confidence interval. |
Value
A named vector with the estimate for D and
the p.value that it is different from 0.
Author(s)
Eric Archer eric.archer@noaa.gov
References
Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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