Survival Analysis

aareg | Aalen's additive regression model for censored data |

aeqSurv | Adjudicate near ties in a Surv object |

aggregate.survfit | Average survival curves |

agreg.fit | Cox model fitting functions |

aml | Acute Myelogenous Leukemia survival data |

anova.coxph | Analysis of Deviance for a Cox model. |

attrassign | Create new-style "assign" attribute |

basehaz | Alias for the survfit function |

bladder | Bladder Cancer Recurrences |

blogit | Bounded link functions |

cch | Fits proportional hazards regression model to case-cohort... |

cgd | Chronic Granulotamous Disease data |

cgd0 | Chronic Granulotomous Disease data |

cipoisson | Confidence limits for the Poisson |

clogit | Conditional logistic regression |

cluster | Identify clusters. |

colon | Chemotherapy for Stage B/C colon cancer |

concordance | Compute the concordance statistic for data or a model |

concordancefit | Compute the concordance |

coxph | Fit Proportional Hazards Regression Model |

coxph.control | Ancillary arguments for controlling coxph fits |

coxph.detail | Details of a Cox Model Fit |

coxphms.object | Multi-state Proportional Hazards Regression Object |

coxph.object | Proportional Hazards Regression Object |

coxph.wtest | Compute a quadratic form |

coxsurv.fit | A direct interface to the 'computational engine' of... |

cox.zph | Test the Proportional Hazards Assumption of a Cox Regression |

diabetic | Ddiabetic retinopathy |

dsurvreg | Distributions available in survreg. |

finegray | Create data for a Fine-Gray model |

flchain | Assay of serum free light chain for 7874 subjects. |

frailty | Random effects terms |

gbsg | Breast cancer data sets used in Royston and Altman (2013) |

heart | Stanford Heart Transplant data |

is.ratetable | Verify that an object is of class ratetable. |

kidney | Kidney catheter data |

levels.Surv | Return the states of a multi-state Surv object |

lines.survfit | Add Lines or Points to a Survival Plot |

logan | Data from the 1972-78 GSS data used by Logan |

logLik.coxph | logLik method for a Cox model |

lung | NCCTG Lung Cancer Data |

mgus | Monoclonal gammopathy data |

mgus2 | Monoclonal gammopathy data |

model.frame.coxph | Model.frame method for coxph objects |

model.matrix.coxph | Model.matrix method for coxph models |

myeloid | Acute myeloid leukemia |

myeloma | Survival times of patients with multiple myeloma |

nafld | Non-alcohol fatty liver disease |

neardate | Find the index of the closest value in data set 2, for each... |

nsk | Natural splines with knot heights as the basis. |

nwtco | Data from the National Wilm's Tumor Study |

ovarian | Ovarian Cancer Survival Data |

pbc | Mayo Clinic Primary Biliary Cholangitis Data |

pbcseq | Mayo Clinic Primary Biliary Cirrhosis, sequential data |

plot.aareg | Plot an aareg object. |

plot.cox.zph | Graphical Test of Proportional Hazards |

plot.survfit | Plot method for 'survfit' objects |

predict.coxph | Predictions for a Cox model |

predict.survreg | Predicted Values for a 'survreg' Object |

print.aareg | Print an aareg object |

print.summary.coxph | Print method for summary.coxph objects |

print.summary.survexp | Print Survexp Summary |

print.summary.survfit | Print Survfit Summary |

print.survfit | Print a Short Summary of a Survival Curve |

pseudo | Pseudo values for survival. |

pspline | Smoothing splines using a pspline basis |

pyears | Person Years |

quantile.survfit | Quantiles from a survfit object |

ratetable | Rate table structure |

ratetableDate | Convert date objects to ratetable form |

rats | Rat treatment data from Mantel et al |

rats2 | Rat data from Gail et al. |

reliability | Reliability data sets |

residuals.coxph | Calculate Residuals for a 'coxph' Fit |

residuals.survfit | IJ residuals from a survfit object. |

residuals.survreg | Compute Residuals for 'survreg' Objects |

retinopathy | Diabetic Retinopathy |

rhDNase | rhDNASE data set |

ridge | Ridge regression |

rotterdam | Breast cancer data set used in Royston and Altman (2013) |

royston | Compute Royston's D for a Cox model |

rttright | Compute redistribute-to-the-right weights |

solder | Data from a soldering experiment |

stanford2 | More Stanford Heart Transplant data |

statefig | Draw a state space figure. |

strata | Identify Stratification Variables |

summary.aareg | Summarize an aareg fit |

summary.coxph | Summary method for Cox models |

summary.pyears | Summary function for pyears objecs |

summary.survexp | Summary function for a survexp object |

summary.survfit | Summary of a Survival Curve |

Surv | Create a Survival Object |

Surv2 | Create a survival object |

Surv2data | Convert data from timecourse to (time1,time2) style |

survcheck | Checks of a survival data set |

survcondense | Shorten a (time1, time2) survival dataset |

survdiff | Test Survival Curve Differences |

survexp | Compute Expected Survival |

survexp.fit | Compute Expected Survival |

survexp.object | Expected Survival Curve Object |

survexp.us | Census Data Sets for the Expected Survival and Person Years... |

survfit | Create survival curves |

survfit0 | Convert the format of a survfit object. |

survfit.coxph | Compute a Survival Curve from a Cox model |

survfitcoxph.fit | A direct interface to the 'computational engine' of... |

survfit.formula | Compute a Survival Curve for Censored Data |

survfit.matrix | Create Aalen-Johansen estimates of multi-state survival from... |

survfit.object | Survival Curve Object |

survival-deprecated | Deprecated functions in package 'survival' |

survival-internal | Internal survival functions |

Survmethods | Methods for Surv objects |

survobrien | O'Brien's Test for Association of a Single Variable with... |

survreg | Regression for a Parametric Survival Model |

survreg.control | Package options for survreg and coxph |

survreg.distributions | Parametric Survival Distributions |

survregDtest | Verify a survreg distribution |

survreg.object | Parametric Survival Model Object |

survSplit | Split a survival data set at specified times |

tcut | Factors for person-year calculations |

tmerge | Time based merge for survival data |

tobin | Tobin's Tobit data |

transplant | Liver transplant waiting list |

udca | Data from a trial of usrodeoxycholic acid |

untangle.specials | Help Process the 'specials' Argument of the 'terms' Function. |

uspop2 | Projected US Population |

vcov.coxph | Variance-covariance matrix |

veteran | Veterans' Administration Lung Cancer study |

xtfrm.Surv | Sorting order for Surv objects |

yates | Population prediction |

yates_setup | Method for adding new models to the 'yates' function. |

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