modcors | R Documentation |
Calculate the correlation between modules
modcors(x, g, mset = NULL, ...)
x |
a data set, with variables (e.g. genes) in rows and samples in columns |
g |
a vector of variable idenitifiers which correspond to the definition of modules |
mset |
a module set |
... |
any further parameters will be passed to the cor() function |
The correlation between modules are defined as correlation coefficient between the modules eigengenes. These are based on a particular gene expression data set.
This function is a simple wrapper combining eigengene() and cor().
a matrix of module correlation coefficients
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