API for AllenInstitute/BarMixer
Hashed scRNA-seq demultiplexing for .h5 files
| Global functions | |
|---|---|
| add_cell_ids | Man page Source code |
| add_h5_list_hash_results | Man page Source code |
| add_h5_transposed_matrix | Man page Source code |
| add_missing_hto_rows | Man page Source code |
| add_well_metadata | Man page Source code |
| binarize_hash | Man page Source code |
| binarize_hash_matrix | Man page Source code |
| cat_h5_list | Man page |
| categorize_binary_hash_matrix | Man page Source code |
| check_matrix | Man page Source code |
| choose_chunk_size | Man page Source code |
| choose_integer_bits | Man page Source code |
| convert_char_na | Man page Source code |
| convert_char_na_recursive | Man page Source code |
| get_list_path | Man page Source code |
| h5_attr_list | Man page Source code |
| h5_list_add_dgCMatrix | Man page Source code |
| h5_list_add_mito_umis | Man page Source code |
| h5_list_cell_metadata | Man page Source code |
| h5_list_convert_from_dgCMatrix | Man page Source code |
| h5_list_convert_to_dgCMatrix | Man page Source code |
| h5_list_transpose | Man page Source code |
| h5dims | Man page Source code |
| h5dump | Man page Source code |
| h5exists | Man page Source code |
| h5ls | Man page Source code |
| hello | Man page |
| is_unimodal | Man page Source code |
| make_singlet_summary | Man page Source code |
| qc_aligned_barplot | Man page |
| qc_cutoff_barplot | Man page |
| qc_flip | Man page Source code |
| qc_frac_hist_plot | Man page Source code |
| qc_hist_plot | Man page Source code |
| qc_scatter_plot | Man page Source code |
| qc_stacked_barplot | Man page |
| qc_table | Man page Source code |
| qc_violin_plot | Man page Source code |
| read_csc_mtx | Man page Source code |
| read_h5_cell_meta | Man page Source code |
| read_h5_dgCMatrix | Man page Source code |
| read_h5_feature_meta | Man page Source code |
| read_h5_sce | Man page Source code |
| read_h5_seurat | Man page Source code |
| read_tenx_metrics | Man page Source code |
| reduce_h5_list | Man page Source code |
| select_hash_cutoff | Man page Source code |
| set_list_path | Man page Source code |
| split_h5_list_by_hash | Man page Source code |
| stm | Man page Source code |
| strip_1d_array_recursive | Man page Source code |
| subset_h5_list_by_observations | Man page Source code |
| totalseq_a_biotin | Man page Source code |
| totalseq_a_human | Man page Source code |
| totalseq_a_mouse | Man page Source code |
| varibow | Man page |
| write_h5_list | Man page Source code |
