IUPAC_CODE_MAP_extended: IUPAC code extended to consider deletions
In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions
IUPAC_CODE_MAP_extended R Documentation
IUPAC code extended to consider deletions
Description
The IUPAC_CODE_MAP_extended named character vector contains the mapping from
the IUPAC nucleotide ambiguity codes to their meaning adding the deletion
code "-", this is required for computing the consensus strings between
overlapping reads.
Usage
IUPAC_CODE_MAP_extended
Format
Named character vector
Source
Adapted from Biostrings object IUPAC_CODE_MAP
AngelCampos/txtools documentation built on April 8, 2024, 6:06 p.m.
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| IUPAC_CODE_MAP_extended | R Documentation |
IUPAC code extended to consider deletions
Description
The IUPAC_CODE_MAP_extended named character vector contains the mapping from the IUPAC nucleotide ambiguity codes to their meaning adding the deletion code "-", this is required for computing the consensus strings between overlapping reads.
Usage
IUPAC_CODE_MAP_extended
Format
Named character vector
Source
Adapted from Biostrings object IUPAC_CODE_MAP
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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