tx_add_endRatio1bpDS: Add ends to coverage ratio 1bp down-stream
In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions
tx_add_endRatio1bpDS R Documentation
Add ends to coverage ratio 1bp down-stream
Description
Add a column to DT of the read-ends to coverage ratio, shifted 1 base-pair
downstream. This means that the last measurement in any gene is always an NA
to account that there was no measurement to be shifted.
Usage
tx_add_endRatio1bpDS(DT, minCov = 50)
Arguments
DT
data.table. A table as output by the tx_makeDT_coverage()
or tx_makeDT_covNucFreq() functions.
minCov
numeric. Minimum coverage required to output ratio. If coverage
is less then an NA is output in that position.
Value
data.table
AngelCampos/txtools documentation built on April 8, 2024, 6:06 p.m.
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| tx_add_endRatio1bpDS | R Documentation |
Add ends to coverage ratio 1bp down-stream
Description
Add a column to DT of the read-ends to coverage ratio, shifted 1 base-pair downstream. This means that the last measurement in any gene is always an NA to account that there was no measurement to be shifted.
Usage
tx_add_endRatio1bpDS(DT, minCov = 50)
Arguments
DT |
data.table. A table as output by the |
minCov |
numeric. Minimum coverage required to output ratio. If coverage is less then an NA is output in that position. |
Value
data.table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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