tx_add_diffNucToRef: Add number of nucleotide reads different to the reference...
In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions
tx_add_diffNucToRef R Documentation
Add number of nucleotide reads different to the reference genome
Description
![[Deprecated]](../help/figures/lifecycle-deprecated.svg)
tx_add_diffNucToRef() was renamed to tx_add_misincCount()
Add a column to DT of the sum of nucleotide frequency different to the
reference sequence counting deletions, without considering 'N's nor inserts
'.' into the calculation.
Usage
tx_add_diffNucToRef(DT)
Arguments
DT
data.table. A data.table object. See
tx_makeDT_coverage, tx_makeDT_nucFreq or
tx_makeDT_covNucFreq functions.
Value
data.table
AngelCampos/txtools documentation built on Sept. 16, 2024, 10:25 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| tx_add_diffNucToRef | R Documentation |
Add number of nucleotide reads different to the reference genome
Description
tx_add_diffNucToRef() was renamed to tx_add_misincCount()
Add a column to DT of the sum of nucleotide frequency different to the reference sequence counting deletions, without considering 'N's nor inserts '.' into the calculation.
Usage
tx_add_diffNucToRef(DT)
Arguments
DT |
data.table. A data.table object. See
|
Value
data.table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.