tx_add_diffNucToRef: Add number of nucleotide reads different to the reference...

Description Usage Arguments Value

View source: R/tx_core.R

Description

Add a column to DT of the sum of nucleotide frequency different to the reference sequence counting deletions, without considering 'N's nor inserts '.' into the calculation.

Usage

1

Arguments

DT

data.table. A data.table object. See tx_makeDT_coverage, tx_makeDT_nucFreq or tx_makeDT_covNucFreq functions.

Value

data.table


AngelCampos/txtools documentation built on Nov. 23, 2020, 7:25 p.m.