tx_add_pos: Add position unique names

In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions

Add position unique names

Description

Adds a column to DT which pastes the name of the gene with its transcript coordinate creating unique position identifiers, for use in downstream analysis which requires them. The column is added after the mandatory 'txcoor' column. Unique names formation is expected and checked by default.

Usage

tx_add_pos(DT, sep = ":", check_uniq = T)

Arguments

DT	data.table. A table as output by the tx_makeDT_coverage(), tx_makeDT_nucFreq() or tx_makeDT_covNucFreq() functions.
sep	character. Separator between gene and txcoor, by deafult colon sign.
check_uniq	logical. Set to false to override unique position names check.

Value

data.table

AngelCampos/txtools documentation built on April 8, 2024, 6:06 p.m.