ahChainFiles: ahChainFile

ahChainFilesR Documentation

ahChainFile

Description

A data frame containing the AnnotationHub id related to the *.chain.gz file, specific for each species and genome. The file name reflects the assembly conversion data contained within in the format <db1>To<Db2>.over.chain.gz. For example, a file named mm10ToHg19.over.chain.gz file contains the liftOver data needed to convert mm10 (Mouse GRCm38) coordinates to hg19 (Human GRCh37).

Usage

data(ahChainFiles)

Format

A data frame with 1113 rows and 2 columns

id

is the AnnotationHub id

chainFile

is the *.chain.gz file

Examples

data(ahChainFiles)


Aufiero/circRNAprofiler documentation built on Nov. 19, 2022, 2:49 a.m.