importMapSplice: Import circRNAs detected by MapSplice2

Description Usage Arguments Value Examples

View source: R/importFilesPredictionTool.R

Description

The function importMapSplice is specifically designed to read and adapt the MapSplice2-v2.2.0 output file (circularRNAs.txt). See https://github.com/davidroberson/MapSplice2 for more details.

Usage

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importMapSplice(pathToFile)

Arguments

pathToFile

A character string specifying the path to the file containing the detected circRNAs.

Value

A data frame.

Examples

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# Path to an example file containing circRNA detected by MapSplice2
pathToFile <- system.file("extdata", "mapsplice/circRNAs_001.txt",
    package="circRNAprofiler")

# Inner function.
# Import circRNAs.
importMapSplice(pathToFile)

Aufiero/circRNAprofiler documentation built on July 22, 2021, 9:34 p.m.