importCircExplorer2: Import circRNAs detected by CircExplorer2

Description Usage Arguments Value Examples

View source: R/importFilesPredictionTool.R

Description

The function importCircExplorer2 is specifically designed to read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt). See https://github.com/YangLab/CIRCexplorer2.git for more details.

Usage

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importCircExplorer2(pathToFile)

Arguments

pathToFile

A character string specifying the path to the file containing the detected circRNAs.

Value

A data frame.

Examples

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# Path to an example file containing circRNAs detected by CIRCexplorer2
pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
package="circRNAprofiler")

# Inner function.
# Import circRNAs.
importCircExplorer2(pathToFile)

Aufiero/circRNAprofiler documentation built on July 22, 2021, 9:34 p.m.