importCircExplorer2: Import circRNAs detected by CircExplorer2
In Aufiero/circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
View source: R/importFilesPredictionTool.R
importCircExplorer2 R Documentation
Import circRNAs detected by CircExplorer2
Description
The function importCircExplorer2 is specifically designed to
read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt).
See https://github.com/YangLab/CIRCexplorer2.git for more details.
Usage
importCircExplorer2(pathToFile)
Arguments
pathToFile
A character string specifying the path to the file
containing the detected circRNAs.
Value
A data frame.
Examples
# Path to an example file containing circRNAs detected by CIRCexplorer2
pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs.
importCircExplorer2(pathToFile)
Aufiero/circRNAprofiler documentation built on Nov. 3, 2024, 10:12 a.m.
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View source: R/importFilesPredictionTool.R
| importCircExplorer2 | R Documentation |
Import circRNAs detected by CircExplorer2
Description
The function importCircExplorer2 is specifically designed to read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt). See https://github.com/YangLab/CIRCexplorer2.git for more details.
Usage
importCircExplorer2(pathToFile)
Arguments
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
Value
A data frame.
Examples
# Path to an example file containing circRNAs detected by CIRCexplorer2
pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs.
importCircExplorer2(pathToFile)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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