initCircRNAprofiler: Initialize the project folder

In Aufiero/circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs

Initialize the project folder

Description

The function initCircRNAprofiler() initializes the project forlder.

Usage

initCircRNAprofiler(projectFolderName, detectionTools)

Arguments

projectFolderName

A character string specifying the name of the project folder.

detectionTools

A character vector specifying the tools used to predict circRNAs. The following options are allowed: mapsplice, nclscan, knife, circexplorer2, circmarker and uroborus. If the tool is not mapsplice, nclscan, knife, circexplorer2, uroborus or circmarker then use the option other. The user can choose 1 or multiple tools. Subfolders named as the specified tools will be generated under the working directory.

Value

A NULL object

Examples

## Not run: 
initCircRNAprofiler(projectFolderName = "circProject",
    detectionTools = "mapsplice")

## End(Not run)

Aufiero/circRNAprofiler documentation built on Nov. 3, 2024, 10:12 a.m.