importOther: Import circRNAs detected by an annotation-based circRNA...

Description Usage Arguments Value Examples

View source: R/importFilesPredictionTool.R

Description

The function importOther() is designed to read output file from a annotation-based circRNA detection tool. The user after the detection of the crcRNAs must format the output file, so that it has the following columns with header: gene, strand, chrom, startUpBSE, endDownBSE and coverage. If more columns are present they will be discared.

Usage

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importOther(pathToFile)

Arguments

pathToFile

A character string specifying the path to the file containing the detected circRNAs.

Value

A data frame.

Examples

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# Path to an example file containing circRNAs
pathToFile <- system.file("extdata", "other/circRNAs_001.txt",
    package="circRNAprofiler")

# Inner function.
# Import circRNAs
importOther(pathToFile)

Aufiero/circRNAprofiler documentation built on July 22, 2021, 9:34 p.m.