importNCLscan: Import circRNAs detected by NCLscan
In Aufiero/circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
View source: R/importFilesPredictionTool.R
importNCLscan R Documentation
Import circRNAs detected by NCLscan
Description
The function importNCLscan is specifically designed to read
and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only
intragenic circRNAs are kept in the analysis.
See https://github.com/TreesLab/NCLscan for more details.
Usage
importNCLscan(pathToFile)
Arguments
pathToFile
A character string specifying the path to the file
containing the detected circRNAs.
Value
A data frame.
Examples
# Path to an example file containing circRNAs detected by NCLscan
pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importNCLscan(pathToFile)
Aufiero/circRNAprofiler documentation built on Nov. 3, 2024, 10:12 a.m.
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View source: R/importFilesPredictionTool.R
| importNCLscan | R Documentation |
Import circRNAs detected by NCLscan
Description
The function importNCLscan is specifically designed to read and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only intragenic circRNAs are kept in the analysis. See https://github.com/TreesLab/NCLscan for more details.
Usage
importNCLscan(pathToFile)
Arguments
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
Value
A data frame.
Examples
# Path to an example file containing circRNAs detected by NCLscan
pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importNCLscan(pathToFile)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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