dbGetModificationsSitesIDs: function to get the modificationSite ID's from (a set of)...

In BenBruyneel/proteinDiscover: ProteinDiscover

function to get the modificationSite ID's from (a set of) proteinUniqueID's

Description

function to get the modificationSite ID's from (a set of) proteinUniqueID's

Usage

dbGetModificationsSitesIDs(db, proteinUniqueIDs, SQL = FALSE)

Arguments

db	database access 'handle'
proteinUniqueIDs	the protein identifier for which the modificationSite ID's are to be fetched. This is a vector of one or more integer64 (package: bit64 ) values. In protein tables this is the UniqueSequenceUD column
SQL	allows the function to return the SQL query statement in stead of a data.frame

Value

a data.frame containing the requested data from the TargetProteinsModificationSites table or a character string specifying an SQL query

Note

the data from modificationSitesUd's in the result can be used to query the ModificationSites table via dbGetModificationsTable

BenBruyneel/proteinDiscover documentation built on March 16, 2024, 4:36 p.m.