dbGetProteins: Function to get protein information from the TargetProteins...

View source: R/proteinDatabase.R

dbGetProteinsR Documentation

Function to get protein information from the TargetProteins table on the basis of their UniqueSequenceID

Description

Function to get protein information from the TargetProteins table on the basis of their UniqueSequenceID

Usage

dbGetProteins(db, UniqueSequenceIDs, columns = NA, SQL = FALSE)

Arguments

db

database access 'handle'

UniqueSequenceIDs

character vector that specifies for which proteins to get info. Please note that in the 'TargetProteins' table the column 'UniqueSequenceID' is integer64 class. To prevent issues these values should be converted to character vector(s).

columns

character vector, specifies which columns to retrieve

SQL

allows the function to return the SQL query statement in stead of a data.frame#'

Value

a data.frame or a character vector (SQL)


BenBruyneel/proteinDiscover documentation built on March 16, 2024, 4:36 p.m.