processPcRequest: Process Pathway Commons request in various formats

In BioPAX/paxtoolsr: Access Pathways from Multiple Databases Through BioPAX and Pathway Commons

Process Pathway Commons request in various formats

Description

Process Pathway Commons request in various formats

Usage

processPcRequest(content, format, ...)

Arguments

content	a string, content to be processed
format	a string, the type of format
...	other arguments passed to read* methods for reading different formats

Value

an R object using one of the read* methods provided in this package corresponding to the format

See Also

pcFormats

Examples

fileName <- system.file("extdata", "test_biopax.owl", package="paxtoolsr")
content <- readChar(fileName, file.info(fileName)$size)
results <- processPcRequest(content, "BIOPAX")

BioPAX/paxtoolsr documentation built on Jan. 31, 2023, 4:22 a.m.