summarize: Summarize a BioPAX file
In BioPAX/paxtoolsr: Access Pathways from Multiple Databases Through BioPAX and Pathway Commons
summarize R Documentation
Summarize a BioPAX file
Description
This function provides a summary of BioPAX classes.
Usage
summarize(inputFile)
Arguments
inputFile
a string of the name of the input BioPAX OWL file
Details
BioPAX classes are defined by the BioPAX specification:
http://www.biopax.org/
Value
list with BioPAX class counts
Examples
summary <- summarize(system.file("extdata", "raf_map_kinase_cascade_reactome.owl",
package="paxtoolsr"))
BioPAX/paxtoolsr documentation built on Jan. 31, 2023, 4:22 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| summarize | R Documentation |
Summarize a BioPAX file
Description
This function provides a summary of BioPAX classes.
Usage
summarize(inputFile)
Arguments
inputFile |
a string of the name of the input BioPAX OWL file |
Details
BioPAX classes are defined by the BioPAX specification: http://www.biopax.org/
Value
list with BioPAX class counts
Examples
summary <- summarize(system.file("extdata", "raf_map_kinase_cascade_reactome.owl",
package="paxtoolsr"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.