IPCellTypeSummary: Identify most highly expressed interaction programs by cell...

IPCellTypeSummaryR Documentation

Identify most highly expressed interaction programs by cell type

Description

Identify most highly expressed interaction programs by cell type

Usage

IPCellTypeSummary(seu, group.by)

Arguments

seu

A seurat object where interaction program expression has been scored by ScoreInteractionPrograms

group.by

meta.data column corresponding to the cell type or cluster annotations to use for aggregating Interaction program expression values

Value

A data.frame with average interaction program expression score for each cell type combination.


BlishLab/scriabin documentation built on Sept. 16, 2024, 1:19 a.m.