crGeneSig: Create single-cell gene signature

View source: R/beta_testing.R

crGeneSigR Documentation

Create single-cell gene signature

Description

Create single-cell gene signature

Usage

crGeneSig(seu, variant_features = NULL, quantile_threshold = 0.1)

Arguments

seu

A seurat object

variant_features

Character vector of variable genes returned by IDVariantGenes

quantile_threshold

Genes a distance less than this threshold will be considered part of the gene signature

Value

A list n cells long with nearest gene-cell distances for each cell

Examples

## Not run: 
ranked_genes <- crGeneSig(seu, variant_features = var_genes)

## End(Not run)

BlishLab/scriabin documentation built on Sept. 16, 2024, 1:19 a.m.