PerturbedBins: Identify most perturbed bins across >2 samples
In BlishLab/scriabin: Single-cell resolved interaction analysis through binning
PerturbedBins R Documentation
Identify most perturbed bins across >2 samples
Description
Identify most perturbed bins across >2 samples
Usage
PerturbedBins(seu, interaction_graphs = NULL)
Arguments
seu
A binned Seurat object with bin identities in the "bin" column of meta.data
interaction_graphs
List of summarized interaction graphs built from BuildPriorInteraction or BuiltWeightedInteraction
Value
For each sender bin-receiver bin combination, returns a data.frame of Kruskal-Wallis p-value and test statistic
BlishLab/scriabin documentation built on July 5, 2023, 1:14 a.m.
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| PerturbedBins | R Documentation |
Identify most perturbed bins across >2 samples
Description
Identify most perturbed bins across >2 samples
Usage
PerturbedBins(seu, interaction_graphs = NULL)
Arguments
seu |
A binned Seurat object with bin identities in the "bin" column of meta.data |
interaction_graphs |
List of summarized interaction graphs built from |
Value
For each sender bin-receiver bin combination, returns a data.frame of Kruskal-Wallis p-value and test statistic
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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